Eaten alive: the double-edged sword of autophagy

I can’t believe how many months I procrastinated in writing this blog post. Among deadlines and diaper changes, it just took me that much time to put my thoughts in order regarding a part of aging that I thought was crystal clear: aging leads to slow clearance therefore autophagy induction must always be a good thing. Wrong!

At a very crude level, turning on autophagy is not that hard. During most mornings, I barely have time to drink my tea instead of eating some calorie-rich breakfast. I wish I could burn fewer calories to reach that elusive normal weight range but tasks just pile up and ideas come to me so fast that I end up as an underweight, sleep-deprived polymath. You see, turning on autophagy is easy once you stress your body: with fasting and/or lots of exercise.
Lots of other negligibly senescent species have an upregulated autophagy, not because they have too many ideas that must be implemented sooner or later, but because they have evolved in harsh environments, deprived of too much oxygen, warmth or nutrients. Autophagy is an ancient evolutionary mechanism that makes organisms more resistant to stress. What doesn’t kill you may help you survive far longer as mild stress is known to induce autophagy and hence, make it more likely for cells to survive and less likely to commit suicide by apoptosis. Unless the stress is too much to handle.
Or unless you don’t want those cells to survive in the first place! This is an angle that I didn’t consider beforehand with my simplistic thinking that inducing autophagy is always a good thing in order to slow down aging.

It so happened that doing something completely unrelated, I stumbled upon the package leaflet of ambroxol, a mucolytic drug used for productive cough and from there to the hypothesis that this drug – and its parent, bromhexine– could be used in parkinsonism because it induces autophagy.


So I thought to myself: if aging impairs autophagy and mucolytic drugs are so cheap and widely available, could this be a path to slow down the inevitable onset of neurodegenerative diseases if one lives long enough?

While autophagy can be modulated by lifestyle (fasting, calorie restriction, exercise which all upregulate it) or by genetic engineering (in lab animals, at least), many commonly used medications induce it. Drugs known for inducing autophagy include rapamycin and metformin. Most people interested in life extension know about these two but here are many others I found that do the same: EGFR antagonists and tamoxifen (mostly used in oncology), clonidine, rilmenidine and verapamil (all three used as antihypertensive agents), mood stabilizers such as lithium, carbamazepine and valproic acid, dietary supplements such as resveratrol, vitamin D, spermidine and coenzyme Q and many others you can check in this review paper.

So there is a huge potential to test autophagy induction in clinical trials and see how that impacts aging-related biomarkers as well as average and maximum lifespan. But given that autophagy upregulation is not a magical solution, I think it would be best if it could be upregulated in short bursts at a time and only after some screening tests for cancers, chronic infections and maybe even for autoimmune diseases and allergies. Since these conditions can occur at any age, it would be great if autophagy could be intermittently modulated on demand. Even better, drugs that could activate autophagy for specific substrates only, whether these include protein aggregates, organelles or microorganisms, would provide the most benefits with the least side effects. For improved aging-related protein clearance, pharmacological modulation of autophagy could also be used together with proteasome modulation when additional proteinopathies are due to unfolded proteins instead of aggregated ones (for example, bortezomib in multiple myeloma).

Autophagy is upregulated in many negligibly senescent species but is it a good idea in humans too?

Mild stress that activates autophagy leads to cytoprotection and given how many somatic cells in adults can’t divide anymore (because we are not hydras, particularly the ones that don’t age), it’s no wonder that people who exercise regularly and who maintain a normal weight range, ideally toward the lower limit of that range, get to collect many decades of life. At the same time, some cells must die to allow the organism as a whole to survive – the same metabolic pathway of autophagy can increase the survival of cancer cells, especially those living in hypoxic areas due to not building up enough blood cells to satisfy their greedy demand for oxygen and nutrients.
Most physicians encounter cancer among their patients but every day, oncologists get to see cellular evolutionary battles in action. Malignant cells are very aggressive and they’ll take advantage of anything, including their own parent cells. Autophagy blockers could sensitize tumor cells to cytotoxic chemotherapy and radiotherapy. Mild stress increases autophagy and may lower the risk of cancer but once a tumor is on its way to taking down the host, blocking autophagy to impair the adaptation of malignant cells to the stress inherent in being a greedy, demanding cell as well as to the stress induced by the many biological therapies that block growth factors – so necessary for them to build a network of blood cells – as well as to the stress induced by toxic therapies like chemotherapy and radiotherapy may be just what is needed to prevent dormant tumor cells from reactivating later on.
Fortunately, two autophagy blockers are already in clinical trials in oncology: chloroquine and hydrochloroquine. These are lysosomal inhibitors and are already used as treatment in malaria and systemic lupus erythematosus.

If autophagy inducers will one day be used widely to slow down aging, especially to postpone the onset of age-related metabolic disorders (diabetes, obesity, steatohepatitis) and neurodegenerative diseases (dementias of all sorts), patients should be screened for cancer. Long-term autophagy induction may improve the housekeeping of cells and make them less likely to divide like crazy but once an individual has cancer, autophagy blockers coupled with toxic therapies prescribed by the oncologist may prove to be a safer bet. Additionally, whether a tumor has defective or intact genes for autophagy may also influence whether autophagy should be increased or decreased in such a patient.

But it’s not only tumors that should be screened.

Chronic infections should be tested too. Microorganisms either block autophagy to evade being digested and/or recognized by the host’s immune system (herpes viruses like HSV-1 in neurons and human CMV in fibroblasts, human HIV-1 in CD4 lymphocytes and macrophages, Porphyromonas gingivalis which is involved in parodontosis and atherosclerosis) or induce autophagy in order to take advantage of the autophagic machinery itself, to get some nutrients for growth and replication, to facilitate viral release from the host cell or to use the autophagosome as a shield and then prevent it from being fused with the lysosome for digestion (HIV in bystander lymphocytes, HCV and HBV in hepatocytes, picornaviruses, Dengue virus, Francisella tularensis, Coxiella burnetii, Brucella abortus). Just like with cancer, it depends whether inducing or blocking autophagy would work in patients with acute or chronic infections, especially if those microorganisms are intracellular. Differences could also occur between what we know about autophagy from in vitro and ex vivo versus what actually happens in vivo, especially if the studied host-microbe pair doesn’t share a long evolutionary history. Because it’s not only hosts that can undergo autophagy.

Microbes can undergo autophagy too, especially if they are eukaryotes themselves.


Autophagy in microorganisms could make them more resistant to stress when nutrients are scarce; alternatively, the stress that leads to autophagy may be necessary for their differentiation into infective forms necessary to attack mammalian hosts like us. In cases of infection, whether autophagy can be detected in vivo or not depends a lot on the host-microorganism pair. It takes two to tango. If the two share a long evolutionary history together, it is very probable that the microorganism learned to either block or subvert autophagy in the host but if you infect cells from another species with that same microorganism, autophagy in the host cell may be more intense because the microorganism didn’t have time to adapt to it.

If you were looking for new pharmacological targets and substances to either induce or block autophagy, microorganisms that share a long history in infecting humans are probably a low-hanging fruit in discovering such molecules.

By virtue of the microorganism involved, such molecules would also be specific to a certain type of tissue and/or substrate.

It would be ideal if such molecules could stimulate or inhibit the autophagy pathway of a certain microorganism in an infected patient but not autophagy in the host. For example, that could be useful in cryptococcosis where the fungus causing it needs autophagy to survive and replicate.

Aging is associated with an increase in microbial load which I previously wrote about here. While drafting this blog post, I mused over neurotropic viruses like HSV-1 whose prevalence increases with age and whether silencing autophagy by such viruses – and probably other microorganisms as well – could explain the age-related increases in protein aggregates, tumors and apoptosis rates in post-mitotic somatic cells. Similarly, could the age-related upregulation of the mTOR metabolic pathway be partially explained by the frequent CMV infection in humans, a virus that activates mTOR to inhibit autophagy for its own good? The virus does this in fibroblasts, cells that produce collagen and glycosaminoglycans. These are the cells that create our structure (which is visibly diminished when wrinkles set in) and also the cells that produce scars when wounds inevitably appear.

There is another way through which autophagy could have mixed effects on maximum lifespan.

If stress is mild, adaptation to that stressor increases and if the stress is too much to handle, the cell will commit suicide by apoptosis. But the stress can also be somewhere in between and the cell will avoid turning into a malignant one by autophagy-enabled senescence. This could be a good thing for the immune system because it would continue to be exposed to antigens related to that stressor (whether the affected cell was dividing too often or whether it was infected with who knows what kind of microorganism) but it could also be a bad thing if too many non-dividing cells become senescent and maintain the organism in a state of chronic inflammation.

In mice and C. elegans at least, autophagy also impacts sexual reproduction, being necessary for degrading the components of the oocyte cytoplasm, for eliminating the paternal mitochondria after fertilization and during the early neonatal starvation period. In case autophagy plays the same role in humans too, family planning should also be taken into consideration before prescribing autophagy inhibitors, if such drugs would be deemed necessary. At least if humans will still reproduce by nature instead of by tech.

Apart from the need to adequately monitor autophagy, preferably non-invasively, side effects of intermittent or even long-term autophagy modulation should be monitored as well.

  • Do patients with long-term autophagy upregulation have fewer mycobacterial or other intracellular infections? Do they develop a chronic inflammatory phenotype due to an increased number of senecescent cells that their body won’t remove on its own? Are cancers missed in such patients more likely to progress to metastases?
  • On the other hand, are patients taking autophagy inhibitors on the long term more likely to develop secondary tumors, infectious or autoimmune diseases? Are they more likely to develop age-related metabolic and neurodegenerative diseases?

The incidence, prevalence and severity of such diseases must be monitored if this double-edged sword called autophagy is to be used for increased lifespan and quality of life with the least side effects possible.

Eaten alive: the double-edged sword of autophagy (blog post)

Anca Ioviţă is the author of Eat Less Live Longer: Your Practical Guide to Calorie Restriction with Optimal Nutrition ,The Aging Gap Between Species and What Is Your Legacy? 101Ways on Getting Started to Create and Build One available on Amazon and several other places. If you enjoyed this article, don’t forget to sign up to receive updates on longevity news and novel book projects!

Don’t miss out on the Pinterest board on calorie restriction with optimal nutrition where she pins new recipes every day.
https://www.pinterest.com/longevityletter/eat-less-live-longer/
Or the Comparative Gerontology Facebook Group where you can join the discussions on how species age at different speeds and what could be the mechanisms underlining these differences!
https://www.facebook.com/groups/683953735071847/

References
Rubinsztein, David C., Patrice Codogno, and Beth Levine. “Autophagy modulation as a potential therapeutic target for diverse diseases.” Nature reviews Drug discovery 11, no. 9 (2012): 709.

Rubinsztein, David C., et al. “Potential therapeutic applications of autophagy.” Nature reviews Drug discovery 6.4 (2007): 304-312.
White, Eileen, and Robert S. DiPaola. “The double-edged sword of autophagy modulation in cancer.” Clinical cancer research 15, no. 17 (2009): 5308-5316.

Liang, S., Ping, Z., & Ge, J. (2017). Coenzyme Q10 regulates Antioxidative stress and autophagy in acute myocardial ischemia-reperfusion injury. Oxidative Medicine and Cellular Longevity, 2017.

Marino, G., Niso-Santano, M., Baehrecke, E. H., & Kroemer, G. (2014). Self-consumption: the interplay of autophagy and apoptosis. Nature reviews Molecular cell biology, 15(2), 81.

Numan, M. (2017). Ambroxol hydrochloride, a chaperone therapy for Paget’s disease of bone and other common autophagy-mediated aging diseases?. Integrative Clinical Medicine, 1(2).

Choi, S. W., Gu, Y., Peters, R. S., Salgame, P., Ellner, J. J., Timmins, G. S., & Deretic, V. (2018). Ambroxol induces autophagy and potentiates rifampin antimycobacterial activity. Antimicrobial agents and chemotherapy, 62(9), e01019-18.

Chauhan, S., Ahmed, Z., Bradfute, S. B., Arko-Mensah, J., Mandell, M. A., Choi, S. W., … & Jiang, S. (2015). Pharmaceutical screen identifies novel target processes for activation of autophagy with a broad translational potential. Nature communications, 6, 8620.

McNeill, A., Magalhaes, J., Shen, C., Chau, K. Y., Hughes, D., Mehta, A., … & Schapira, A. H. (2014). Ambroxol improves lysosomal biochemistry in glucocerebrosidase mutation-linked Parkinson disease cells. Brain, 137(5), 1481-1495.

Deretic, V., & Levine, B. (2009). Autophagy, immunity, and microbial adaptations. Cell host & microbe, 5(6), 527-549.

Levine, B., Mizushima, N., & Virgin, H. W. (2011). Autophagy in immunity and inflammation. Nature, 469(7330), 323.

Jo, E. K. (2010). Innate immunity to mycobacteria: vitamin D and autophagy. Cellular microbiology, 12(8), 1026-1035.

Verbaanderd, C., Maes, H., Schaaf, M. B., Sukhatme, V. P., Pantziarka, P., Sukhatme, V., … & Bouche, G. (2017). Repurposing Drugs in Oncology (ReDO)—chloroquine and hydroxychloroquine as anti-cancer agents. ecancermedicalscience, 11.

Tsukamoto, S., Kuma, A., Murakami, M., Kishi, C., Yamamoto, A., & Mizushima, N. (2008). Autophagy is essential for preimplantation development of mouse embryos. Science, 321(5885), 117-120.

Al Rawi, S., Louvet-Vallée, S., Djeddi, A., Sachse, M., Culetto, E., Hajjar, C., … & Galy, V. (2011). Postfertilization autophagy of sperm organelles prevents paternal mitochondrial DNA transmission. Science, 334(6059), 1144-1147.

Kuma, A., Hatano, M., Matsui, M., Yamamoto, A., Nakaya, H., Yoshimori, T., … & Mizushima, N. (2004). The role of autophagy during the early neonatal starvation period. Nature, 432(7020), 1032.

7 comments

  1. Hello Anca, great that you’re continuing to do research and write articles!

    I’m no expert of course, but it seems to me this one is very good, and especially to be read by all biohackers and people excited about autophagy-mediated attack on senescence.

    My mind gets dizzy at so many things going on at the molecular level, so many things to take into consideration in this huge puzzle. My conclusion is that, due my lack of sufficient background, I better don’t even try to understand and then act on a limited understanding. Instead, better wait till “they” have large clinical trials for what works IN PRACTICE.

    That being said, I’m curious… since encouraging autophagy is risky (as you explained so well), how about encouraging apoptosis ? Like, kill a part of the senescent cells (and especially the cancerous ones) , and let the healthier ones continue to live.
    Have you thought of writing an article on this?

    1. Hi Victor, nice to hear from you again!

      Biohacking is a work in progress and all the blog posts you see here derive either from me trying to understand aging better and me trying to analyze whether biohacking in some area has any surprise risks I’m not willing to incur. The CRON diet, exercise, cognitive stimulation by using the Internet, career redesign – are also forms of biohacking. I take quite a few dietary supplements but you’d never guess it because they’re not pills; I buy them as powders and add to them to food (raw or cooked) or I drink them as teas (I love teas anyway!). I don’t inject stuff or implant chips and I don’t take metformin, rapamycin, aspirin or anything else not prescribed by a physician – other than myself, I mean – because at this point in my life, I consider the risks (for me) to be higher than the benefits. But I’m still interested in what I could do better and this is how I get inspiration for writing on this blog. I can’t not continue because I don’t see what area of study would be more useful to a polymath other than life extension 🙂

      My mind gets dizzy from details too which is why I use writing to clarify my thoughts but also pay for consultancy when needed. Unfortunately, even if there are good clinical trials out there, no physician can know it all and it takes some years before clinical practice guidelines change so I’ll still try to understand things on my own. Being a physician myself helps with understanding but I also love the brain candy involved in researching life extension stuff and I’m also aware of the limits in knowledge access when you do nightshifts and see patients one after another for hours. Frankly speaking, I am better updated on medicine now that I don’t do clinical work anymore than when I was in the hospital every day. This is why I’m a big supporter of including as much AI software in clinical practice as possible because knowledge can be uploaded in AI as it is published and AI could immediately decide on the probability of a certain clinical trial to fit a particular patient that is of a certain ethnicity, gender, life stage, has a certain income, has peculiar values and so on.

      Thank you for the article idea! Probably apoptosis should be done moderately just like autophagy should. Apoptosis is upregulated with age just like autophagy is downregulated. Regenerative medicine could shift these limits back to the youth state. This is what is missing in the clinical world.
      I don’t think autophagy is risky. I think:
      1. general, low-level autophagy is good in most people to slow down aging and reduce the risk of cancer.
      2. specific, intermittent autophagy is better but the technology doesn’t exist yet.
      3. autophagy should mainly be impaired in some types of cancer and some chronic infections (chronic hepatitis C/B but not tuberculosis), especially after more clinical trials would be available. Cancer and chronic infection screening is very important and very easy to postpone because of life’s more urgent stuff to do. Cancer screening is especially easy to ignore when young, both by the patient and by the physician.

  2. Reading between the lines, it appears that calorie restriction, fasting, and exercise are the preferred ways to induce autophagy, in that the worries you mention above do not apply. This is, of course, shown by many populations through the ages.

    This is some evidence that berries, perhaps via pterostilbene, may also enhance autophagy:

    https://medicalxpress.com/news/2013-04-evidence-berries-health-promoting-properties.html
    https://www.sciencedirect.com/science/article/pii/S1021949816301855

    Also quercetin, widely distributed in the plant world:
    https://www.lifeextension.com/Magazine/2016/10/Natural-Compounds-that-Remove-Aging-Cells/Page-01
    Quercetin is so potent that it has been labelled a senolytic:
    https://arstechnica.com/science/2018/07/drugs-that-kill-off-old-cells-may-limit-a-bodys-aging/
    https://en.wikipedia.org/wiki/Senolytic

    Autophagy is inhibited by leucine, methionine, and MTOR
    http://www.jbc.org/content/275/38/29900.full
    https://www.ncbi.nlm.nih.gov/pubmed/24362312
    https://www.nature.com/articles/ncb2152
    https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3255710/

    1. General, low-level autophagy is probably good prevention in most people but I’d still take intermittent, specific autophagy treatment when appropriate because as age increases, the risk of cancer and chronic infections increases as well. Not all cancers and not all microorganisms infecting humans need autophagy to be impaired though but that can only be found by regular testing and clinical trials.
      Thank you for the links! Indeed, I forgot about quercetin and pterosilbene. Do you take these as dietary supplements or from food only?

  3. Thank you very much for the detailed reply. Yes, I agree reading about clinical trials can be useful. Though you go way beyond that in your articles, as you also research what happens in other species.
    Glad you’re enjoying it!

Leave a comment

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.